B0300

Sigma-Aldrich

Betaine solution

5 M, PCR Reagent

Linear Formula:
(CH3)3N+CH2COO
CAS Number:
Molecular Weight:
117.15
Beilstein/REAXYS Number:
3537113
MDL number:
PubChem Substance ID:

grade

PCR Reagent

Quality Level

form

liquid

packaging

vial of 1.5 mL

concentration

5 M

application(s)

PCR: suitable

color

colorless

Featured Industry

Agriculture

foreign activity

DNase, RNase, none detected

storage temp.

2-8°C

SMILES string

C[N+](C)(C)CC([O-])=O

InChI

1S/C5H11NO2/c1-6(2,3)4-5(7)8/h4H2,1-3H3

InChI key

KWIUHFFTVRNATP-UHFFFAOYSA-N

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General description

Betaine also called trimethylglycine or N,N,N triethylammonium acetate, is an analog of glycine with three methyl groups. It is highly compatible with polymerase chain reaction (PCR) buffer mixture. Betaine is a PCR enhancing reagent that is widely used for improving the yield and specificity of PCR products, especially during the PCR amplification of targets rich in GC content or those that form secondary structures resulting in poor yield. Betaine facilitates DNA strand separation and manages the DNA melting temperature (Tm) difference between the GC and AT pairs in DNA.It stabilizes the ds DNA by equalizing the contribution of GC- and AT-base pairs.It stabilizes the ds DNA by equalizing the contribution of GC- and AT-base pairs. Betaine has been broadly used to optimize multiplex and ‘long and accurate′ polymerase chain reaction (LA-PCR). The addition of 1.0-1.7 M aqueous betaine to a PCR mixture has been reported to reduce the base pair composition dependence on DNA strand melting.

Application

Betaine solution has been used as a component of
  • loop-mediated isothermal amplification (LAMP) reactions
  • polymerase chain reaction for genomic DNA amplification
  • quantitative polymerase chain reaction (qPCR) for telomere length analysis
  • in the PCR amplification of CGG repeats in the genomic DNA.

Packaging

1.5mL per vial

storage_class_code

12 - Non Combustible Liquids

WGK Germany

WGK 3

Flash Point(F)

Not applicable

Flash Point(C)

Not applicable

Certificate of Analysis

Certificate of Origin

DMSO and betaine greatly improve amplification of GC-rich constructs in de novo synthesis
Jensen, Michael A and Fukushima, Marilyn and Davis, Ronald W
PLoS ONE, 5(6), e11024-e11024 (2010)
Molecular characterization of X chromosome fragility in idiopathic mental retardation
Omar HAH, et al.
The Egyptian journal of medical human genetics., 17(2), 165-172 (2016)
Thirty-minute screening of antibiotic resistance genes in bacterial isolates with minimal sample preparation in static self-dispensing 64 and 384 assay cards
Kostic T, et al.
Applied Microbiology and Biotechnology, 99(18), 7711-7722 (2015)
P N Hengen
Trends in biochemical sciences, 22(6), 225-226 (1997-06-01)
Methods and reagents is a unique monthly column that highlights current discussions in the newsgroup bionet.molbio.methds-reagnts, available on the internet. This month's column discusses the use of additives for optimizing the amount and quality of product obtained through multiplex and...
Hela Azaiez et al.
Human mutation, 24(4), 305-311 (2004-09-15)
Genetic testing was completed on 1,294 persons with deafness referred to the Molecular Otolaryngology Research Laboratories to establish a diagnosis of DFNB1. Exon 2 of GJB2 was screened for coding sequence allele variants by denaturing high-performance liquid chromatography (DHPLC) complemented...
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