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  • Publicly Available hiPSC Lines with Extreme Polygenic Risk Scores for Modeling Schizophrenia.

Publicly Available hiPSC Lines with Extreme Polygenic Risk Scores for Modeling Schizophrenia.

Complex psychiatry (2021-12-10)
Kristina Dobrindt, Hanwen Zhang, Debamitra Das, Sara Abdollahi, Tim Prorok, Sulagna Ghosh, Sarah Weintraub, Giulio Genovese, Samuel K Powell, Anina Lund, Schahram Akbarian, Kevin Eggan, Steven McCarroll, Jubao Duan, Dimitrios Avramopoulos, Kristen J Brennand
要旨

Schizophrenia (SZ) is a common and debilitating psychiatric disorder with limited effective treatment options. Although highly heritable, risk for this polygenic disorder depends on the complex interplay of hundreds of common and rare variants. Translating the growing list of genetic loci significantly associated with disease into medically actionable information remains an important challenge. Thus, establishing platforms with which to validate the impact of risk variants in cell-type-specific and donor-dependent contexts is critical. Towards this, we selected and characterized a collection of 12 human induced pluripotent stem cell (hiPSC) lines derived from control donors with extremely low and high SZ polygenic risk scores (PRS). These hiPSC lines are publicly available at the California Institute for Regenerative Medicine (CIRM). The suitability of these extreme PRS hiPSCs for CRISPR-based isogenic comparisons of neurons and glia was evaluated across 3 independent laboratories, identifying 9 out of 12 meeting our criteria. We report a standardized resource of publicly available hiPSCs on which we hope to perform genome engineering and generate diverse kinds of functional data, with comparisons across studies facilitated by the use of a common set of genetic backgrounds.

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N6,2′-O-ジブチリルアデノシン3′,5′-サイクリック一リン酸 ナトリウム塩, ≥96% (HPLC), powder
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ピューロマイシン 二塩酸塩 Streptomyces alboniger由来, ≥98% (HPLC), powder
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抗GABA ウサギ宿主抗体, affinity isolated antibody, buffered aqueous solution
Sigma-Aldrich
シトシン β-D-アラビノフラノシド 塩酸塩, crystalline
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抗ネスチン抗体、クローン10C2, clone 10C2, Chemicon®, from mouse
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抗MAP2(2a+2b)抗体、マウスモノクローナル マウス宿主抗体, clone AP-20, ascites fluid
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Rho Kinase Inhibitor, The Rho kinase inhibitor, CAS 872543-07-6, is a cell-permeable, highly specific, reversible, potent, and ATP-competitive inhibitor of Rho-associated kinase (ROCK; Ki = 1.6 nM).
Sigma-Aldrich
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Sigma-Aldrich
Anti-Human Nuclei Antibody, clone 235-1, Biotin Conjugate, clone 235-1, from mouse, biotin conjugate