Accéder au contenu
MilliporeSigma

Proteomics analysis of urine reveals acute phase response proteins as candidate diagnostic biomarkers for prostate cancer.

Proteome science (2015-02-06)
Katarina Davalieva, Sanja Kiprijanovska, Selim Komina, Gordana Petrusevska, Natasha Chokrevska Zografska, Momir Polenakovic
RÉSUMÉ

Despite the overall success of prostate specific antigen (PSA) in screening and detection of prostate cancer (PCa), its use has been limited due to the lack of specificity. The principal driving goal currently within PCa research is to identify non-invasive biomarker(s) for early detection of aggressive tumors with greater sensitivity and specificity than PSA. In this study, we focused on identification of non-invasive biomarkers in urine with higher specificity than PSA. We tested urine samples from PCa and benign prostatic hyperplasia (BPH) patients by 2-D DIGE coupled with MS and bioinformatics analysis. Statistically significant (p < 0.05), 1.8 fold variation or more in abundance, showed 41 spots, corresponding to 23 proteins. The Ingenuity Pathway Analysis showed significant association with the Acute Phase Response Signaling pathway. Nine proteins with differential abundances were included in this pathway: AMBP, APOA1, FGA, FGG, HP, ITIH4, SERPINA1, TF and TTR. The expression pattern of 4 acute phase response proteins differed from the defined expression in the canonical pathway. The urine levels of TF, AMPB and HP were measured by immunoturbidimetry in an independent validation set. The concentration of AMPB in urine was significantly higher in PCa while levels of TF and HP were opposite (p < 0.05). The AUC for the individual proteins ranged from 0.723 to 0.754. The combination of HP and AMBP yielded the highest accuracy (AUC = 0.848), greater than PSA. The proposed biomarker set is quickly quantifiable and economical with potential to improve the sensitivity and specificity of PCa detection.

MATÉRIAUX
Référence du produit
Marque
Description du produit

Sigma-Aldrich
Acétonitrile, suitable for HPLC, gradient grade, ≥99.9%
Sigma-Aldrich
Acide trifluoroacétique, ReagentPlus®, 99%
Sigma-Aldrich
Acide trifluoroacétique, suitable for HPLC, ≥99.0%
Sigma-Aldrich
Acétonitrile, HPLC Plus, ≥99.9%
Sigma-Aldrich
Acide trifluoroacétique, puriss. p.a., suitable for HPLC, ≥99.0% (GC)
Sigma-Aldrich
Acétonitrile, ACS reagent, ≥99.5%
Sigma-Aldrich
Acétonitrile, suitable for HPLC, gradient grade, ≥99.9%
Sigma-Aldrich
Acétonitrile, anhydrous, 99.8%
Sigma-Aldrich
Acide trifluoroacétique, ≥99%, for protein sequencing
Sigma-Aldrich
Acétonitrile, suitable for HPLC-GC, ≥99.8% (GC)
Sigma-Aldrich
Acétonitrile, biotech. grade, ≥99.93%
Sigma-Aldrich
Acétonitrile, ReagentPlus®, 99%
Sigma-Aldrich
Acétonitrile, suitable for DNA synthesis, ≥99.9% (GC)
Sigma-Aldrich
Acétonitrile, electronic grade, 99.999% trace metals basis
Sigma-Aldrich
Creatinine, anhydrous, ≥98%
Sigma-Aldrich
Acétonitrile, HPLC Plus, ≥99.9%, poly-coated bottles
Supelco
Acétonitrile, Pharmaceutical Secondary Standard; Certified Reference Material
Sigma-Aldrich
Acétonitrile, ≥99.5% (GC)
Supelco
Acide trifluoroacétique, analytical standard
Sigma-Aldrich
Acetonitrile solution, contains 0.1 % (v/v) trifluoroacetic acid, suitable for HPLC
Sigma-Aldrich
Acetonitrile solution, contains 0.1 % (v/v) formic acid, suitable for HPLC
USP
Residual Solvent Class 2 - Acetonitrile, United States Pharmacopeia (USP) Reference Standard
Supelco
Acétonitrile, suitable for HPLC, gradient grade, ≥99.9% (GC)
Supelco
Acétonitrile, analytical standard
Sigma-Aldrich
Acétonitrile, ≥99.5%, ACS reagent
Supelco
Creatinine, Pharmaceutical Secondary Standard; Certified Reference Material
Sigma-Aldrich
Acétonitrile, puriss. p.a., ACS reagent, reag. Ph. Eur., ≥99.5% (GC)
Supelco
Acétonitrile, Pharmaceutical Secondary Standard; Certified Reference Material
Sigma-Aldrich
Adrenocorticotropic Hormone Fragment 7-38 human, ≥97% (HPLC)
Sigma-Aldrich
Acetonitrile solution, contains 0.05 % (w/v) ammonium formate, 5 % (v/v) water, 0.1 % (v/v) formic acid, suitable for HPLC