KOD One™ PCR Master Mix for Ultra-Fast, High-Fidelity PCR

WHAT IS PCR MASTER MIX?

PCR Master Mix is a ready-mix of PCR reagents. PCR is widely used across molecular biology labs to amplify specific fragments of DNA. Our PCR homepage provides helpful links to more information on the basics of PCR, including resources for PCR Master Mix.

PCR Master Mix takes the guesswork out of PCR by being a batch mixture of PCR reagents at optimal concentrations that can be prepared once and divided among many PCR tubes or PCR plates. It is convenient, time-saving, and preempts possible errors in mixing, making it an ideal choice for high-throughput applications.

Common applications of PCR Master Mix are high throughput PCR and routine PCR. These mixes are ideal because they circumvent reagents being entirely left out of a reaction and delivering false negatives as a result.

For more information about types of mixes and their components, please visit our PCR Master Mix page.

Get a 30% discount on KOD One™ PCR Master Mix. Click below for the code!

• Introduction to KOD One™ PCR Master Mix
• KOD One™ PCR Master Mix Features and Benefits
• KOD One™ PCR Reagent Comparison Table
• Order KOD One™ PCR Reagents

INTRODUCTION TO KOD One™ PCR MASTER MIX

Traditional PCR can take time to complete and obtain results. Unfortunately, time is a valuable resource, especially when you have numerous samples. Fast PCR allows you to obtain your results in a shorter timeframe than traditional PCR, making it an efficient option.

The new KOD One™ PCR Master Mix offers ultra-fast, high-fidelity PCR with one of the fastest elongation rates available for high fidelity polymerases. It uses a new genetically modified hot start KOD polymerase (UKOD) to enable ultra-fast PCR while offering the highest specificity, accuracy, and yield. The KOD One™ polymerase is made of a new DNA polymerase with a significantly faster elongation time of 5 seconds per kb (5 sec/kb) by applying both the UKOD and an elongation enhancer that is unique to this product. It also shows a 80-fold higher fidelity than Taq DNA polymerase.

The KOD One™ PCR Master Mix is a flexible product, provided in a convenient, ready-to-use format, with the ability to use it directly on crude samples like blood and mouse cell lysates. In addition to crude samples, it can be used on templates containing uracils (dU). The master mix can use primers containing both inosines (dI) and dU for amplification.

The hot start KOD polymerase is antibody-inactivated with two types of antibodies that prevent the 5' → 3' polymerase activity and 3'→5' exonuclease activities. Upon heat-activation, the 3'→5' proof-reading ability of the enzyme generates blunt-end PCR products. Features like a hot-start format for specific enzyme activity, as well as higher fidelity than most polymerases, add to the flexibility of this master mix to be used in different applications.

Animation: Learn how KOD One™ polymerase enables PCR in < 15 minutes

KOD One™ PCR Master Mix Features and Benefits

The KOD One™ PCR Master Mix formulation offers the following advanced features:

• Ready-to-Use
• High Fidelity
• High Efficiency
• Crude Sample PCR
• High Specificity
• Primers with dI and dU

1. Ready-to-Use: Convenient 2X premixed solution of UKOD DNA polymerase, buffer, dNTPs, and MgCl2. Also, KOD One™ PCR Master Mix Blue includes a loading dye (BPB) to allow direct loading onto agarose gels.

2. High Fidelity: The KOD One™ polymerase shows approximately 80-fold higher fidelity than Taq DNA polymerase.

3. High Efficiency: KOD One™ PCR Master Mix enables high throughput PCR and ultra-fast PCR cycling conditions with an extension time of as quick as 5 sec/kb.

Reaction Mix
KOD One TM PCR Master Mix	10 µL
10 µM Fwd	0.6 µL
10 µM Rev	0.6 µL
4 ng/µL Human genome	1 µL
H2O	Up to 20 µL

PCR Conditions
98oC, 0:10
60oC, 0:05
68oC, 0:01	X30

Fast PCR: Amplification time using very short cycling conditions
<1 kb: 1 sec
1-10 kb: 5 sec/kb
>10 kb: 10 sec/kb

1	200 bp
2	250 bp
3	300 bp
4	400 bp
5	500 bp
6	550 bp
7	600 bp
8	700 bp
9	800 bp
10	1,000 bp
M	100 bp DNA Ladder

4. Crude Sample PCR: KOD One™ PCR Master Mix is effective for direct PCR amplification of crude samples such as biological samples, food samples, soil extract, etc.

5. High Specificity: Overcome the inhibitory effect of RNA (in cDNA) using KOD One™ PCR Master Mix to amplify specific targets in the presence of a high concentration of cDNA.

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6. Primers with dI and dU: KOD One™ PCR Master Mix amplifies fragments using degenerate primers with inosines and uracils.

Primer sequences
Fwd: ATGGTICARATHCCICARAAY
Rev: RTGIGCYTGRTCCCARTTYTC

Choose the right KOD DNA Polymerase and Master Mix for Your Application

Simplify your gene discovery and advance your molecular research with the high-fidelity, thermostable KOD DNA Polymerase designed for accurate PCR amplification of DNA templates. With superior performance, fast extension rate, higher accuracy, higher processivity and robust yield compared to other thermophilic polymerases, KOD DNA polymerase is the PCR enzyme of choice when speed and fidelity matter. We offer a wide variety of KOD DNA polymerases and master mixes to choose from depending on the sample type and the application.

++++ = Best; +++ = Excellent or Strong; ++ = Good or Moderate; + = Satisfactory; - = Not good or minus; ✓ = Applicable

Product Name	Product Number	Fidelity (3'→5' Exonuclease activity)	Efficiency	Velocity (Extension time)	Target size	Crude sample	Hot-start	PCR Product Ends	Key Applications	Key Feature
KOD OneTM PCR Master Mix	KMM-101NV	80-fold ++++	+++	5 sec/kb ++++	~40 kb	++++	✓	blunt	Crude samples, long targets, templates containing uracil, amplify using primers containing inosines (dI) and uracils (dU); suitable for templates with high GC content of up to 70%	Ultra-fast; High Fidelity
KOD OneTM PCR Master Mix - Blue	KMM-201NV
KOD Hot Start Master Mix	71842	80-fold ++++	++	1 min/kb +	~12 kb	+	✓	blunt	Cloning, cDNA amplification. Amplifies genomic DNA up to 12 kbp and plasmid DNA up to 21 kbp, including GC-rich regions.	High fidelity
KOD Hot Start DNA Polymerase	71086
KOD XtremeTM Hot Start DNA Polymerase	71975-M	11-fold +++	+++	1 min/kb +	~24 kb	+++	✓	blunt	Crude samples, long targets, difficult and GC-rich targets (up to 90% GC content)	High success-rate DNA polymerase (GC-rich and crude sample)
KOD XL DNA Polymerase	71087	3-fold +	+++	≤0.5 min/kb +++	~18 kb	++	-	mixed (blunt & 3'-dA)	Crude samples, multiplex, incorporation of derivatized dNTPs	High Speed & Efficient DNA polymerase
KOD DNA Polymerase	71085	3-fold +	++	1 min/kb +	~6 kb	-	-	blunt	Cloning, cDNA amplification	2X higher elongation rate and 3X higher fidelity than Taq DNA polymerase

Relevant Applications

This product has a variety of applications including genomic DNA amplification^1,2, Direct PCR, Colony PCR, NGS library amplification, and PCR amplification to detect site-directed mutagenesis (mutation generation).

A key application of KOD One™ PCR Master Mix is oncology research. In the age of genetics and researching gene-specific targets, tools like the hot start KOD polymerase are imperative for amplifying cDNA to analyze gene expression. This ultra-fast PCR product is ideal and would allow researchers to analyze gene expression more efficiently with higher yield while having low error rates due to the high fidelity when compared to other DNA polymerases.

References

1. Cortes-Silva N, Ulmer J, Kiuchi T, Hsieh E, Cornilleau G, Ladid I, Dingli F, Loew D, Katsuma S, Drinnenberg IA. 2020. CenH3-Independent Kinetochore Assembly in Lepidoptera Requires CCAN, Including CENP-T. Current Biology. 30(4):561-572.e10. https://doi.org/10.1016/j.cub.2019.12.014

2. Yokoshi M, Segawa K, Fukaya T. 2020. Visualizing the Role of Boundary Elements in Enhancer-Promoter Communication. Molecular Cell. 78(2):224-235.e5. https://doi.org/10.1016/j.molcel.2020.02.007