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  • QSPR modeling of octanol/water partition coefficient for vitamins by optimal descriptors calculated with SMILES.

QSPR modeling of octanol/water partition coefficient for vitamins by optimal descriptors calculated with SMILES.

European journal of medicinal chemistry (2007-07-17)
A A Toropov, A P Toropova, I Raska
ABSTRACT

Simplified molecular input line entry system (SMILES) has been utilized in constructing quantitative structure-property relationships (QSPR) for octanol/water partition coefficient of vitamins and organic compounds of different classes by optimal descriptors. Statistical characteristics of the best model (vitamins) are the following: n=17, R(2)=0.9841, s=0.634, F=931 (training set); n=7, R(2)=0.9928, s=0.773, F=690 (test set). Using this approach for modeling octanol/water partition coefficient for a set of organic compounds gives a model that is statistically characterized by n=69, R(2)=0.9872, s=0.156, F=5184 (training set) and n=70, R(2)=0.9841, s=0.179, F=4195 (test set).

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Retinol, synthetic, ≥95% (HPLC), (Powder or Powder with Lumps)
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L-Ascorbic acid, BioXtra, ≥99.0%, crystalline
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Cholecalciferol, ≥98% (HPLC)
Sigma-Aldrich
Cholecalciferol, meets USP testing specifications
Sigma-Aldrich
L-Ascorbic acid, suitable for cell culture, suitable for plant cell culture, ≥98%
Sigma-Aldrich
Cholecalciferol, analytical standard
Sigma-Aldrich
L-Ascorbic acid, reagent grade
Sigma-Aldrich
Ethylbenzene solution, NMR reference standard, 0.1% in chloroform-d (99.8 atom % D), TMS 0.01 %, NMR tube size 5 mm × 8 in. , ultra-thin wall
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Orotic acid, ≥98% (titration), anhydrous
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4-Aminobenzoic acid, ReagentPlus®, ≥99%
Supelco
m-Xylene, analytical standard
Supelco
Heptane, analytical standard
Sigma-Aldrich
Propylbenzene, ≥99.0% (GC)
Supelco
Mesitylene, analytical standard
Supelco
Decane, analytical standard
Supelco
Nonane, analytical standard
Sigma-Aldrich
Trichlorofluoromethane solution, NMR reference standard, 10% in acetone-d6 (99.9 atom % D), TMS 6 %, 1,2-dichloro-1,1-difluoroethane 1 %
Sigma-Aldrich
1-Chloronaphthalene, technical, ≥85% (GC)
Supelco
Tetrachloroethylene, analytical standard
Supelco
Cyclohexane, analytical standard
Supelco
Undecane, analytical standard
Supelco
Propylbenzene, analytical standard
Supelco
Fluorobenzene, analytical standard
Sigma-Aldrich
Decane, ≥95%
Supelco
Trichloroethylene, analytical standard, stabilized with 30 – 50 ppm Diisopropylamine
Sigma-Aldrich
L-Ascorbic acid, BioUltra, ≥99.5% (RT)
Supelco
1-Methylnaphthalene, analytical standard
Supelco
1,1,2,2-Tetrachloroethane, analytical standard
Sigma-Aldrich
L-Ascorbic acid, puriss. p.a., ≥99.0% (RT)
Supelco
Chlorobenzene, analytical standard