Skip to Content
Merck
  • Agarose overlay selectively improves macrocolony formation and radiosensitivity assessment in primary fibroblasts.

Agarose overlay selectively improves macrocolony formation and radiosensitivity assessment in primary fibroblasts.

International journal of radiation biology (2014-02-18)
Sudhir Chandna, Raghubendra Singh Dagur, Ankit Mathur, Adayapalam Tyagarajan Natarajan, Mats Harms-Ringdahl, Siamak Haghdoost
ABSTRACT

Primary fibroblasts are not suitable for in vitro macrocolony assay due to their inability to form distinct colonies. Here we present a modification of agarose overlay that yielded extensive improvement in their colony formation and assessment of radiosensitivity. Macrocolony formation was assessed in primary human fibroblasts VH10 and HDFn with or without overlay using 0.5% agarose in growth medium at 24 h post-seeding. Malignant human cell lines (A549, U87) and transformed non-malignant fibroblasts (AA8 hamster, MRC5 human) were used for comparison. Agarose overlay caused significant improvement marked by early appearance (one week) of distinct colonies with high cell density and multifold higher plating efficiency than conventional macrocolony assay in VH10 and HDFn human fibroblasts. Compared to conventional assay or feeder cell supplementation, agarose overlay resulted in broader cell morphology due to improved adherence, and yielded more compact colonies. Gamma-radiation dose-response survival curves could be successfully generated for both fibroblast cell lines using this method, which yielded no such effects in the transformed/malignant cell lines tested. This easy and inexpensive 'agarose overlay technique' significantly and selectively improves the fibroblast plating efficiency, thus considerably reducing time and effort to greatly benefit the survival studies on primary fibroblasts.

MATERIALS
Product Number
Brand
Product Description

Sepharose 6B, Cytiva 17-0110-01, pack of 1 L
Sepharose 4B, Cytiva 17-0120-01, pack of 1 L
Sigma-Aldrich
Sepharose 6B, 6% Beaded Agarose, 45-165 μm (wet), fractionation range 10,000-1,000,000 Da (dextrans)
Sigma-Aldrich
Sepharose 4B, 45-165 μm bead diameter
Sigma-Aldrich
Agarose, Type II-A, Medium EEO
Sigma-Aldrich
Agarose, Type IV, Special High EEO
Sigma-Aldrich
Agarose, High Gelling Temperature
Sigma-Aldrich
Agarose, Special High EEO
Sigma-Aldrich
Agarose, Wide range, for molecular biology
Sigma-Aldrich
Agarose, For pulsed field electrophoresis running gel
Sigma-Aldrich
Agarose, Type I-A, low EEO
Sigma-Aldrich
Agarose, BioReagent, for molecular biology, low EEO
Sigma-Aldrich
Agarose, Low EEO
Sigma-Aldrich
Agarose, BioReagent, for molecular biology, Wide range/Standard 3:1
Sigma-Aldrich
Agarose, Ultra-low Gelling Temperature, molecular biology grade
Sigma-Aldrich
Agarose, Low EEO, for Immunoelectrophoresis
Sigma-Aldrich
Agarose, Type I, low EEO
Sigma-Aldrich
Agarose, Medium EEO, for molecular biology
Sigma-Aldrich
Agarose, for molecular biology
Sigma-Aldrich
Agarose, High EEO
Sigma-Aldrich
Agarose, High EEO, for molecular biology