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  • QSPR modeling of octanol/water partition coefficient for vitamins by optimal descriptors calculated with SMILES.

QSPR modeling of octanol/water partition coefficient for vitamins by optimal descriptors calculated with SMILES.

European journal of medicinal chemistry (2007-07-17)
A A Toropov, A P Toropova, I Raska
ABSTRACT

Simplified molecular input line entry system (SMILES) has been utilized in constructing quantitative structure-property relationships (QSPR) for octanol/water partition coefficient of vitamins and organic compounds of different classes by optimal descriptors. Statistical characteristics of the best model (vitamins) are the following: n=17, R(2)=0.9841, s=0.634, F=931 (training set); n=7, R(2)=0.9928, s=0.773, F=690 (test set). Using this approach for modeling octanol/water partition coefficient for a set of organic compounds gives a model that is statistically characterized by n=69, R(2)=0.9872, s=0.156, F=5184 (training set) and n=70, R(2)=0.9841, s=0.179, F=4195 (test set).

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
1,4-Dibromobenzene, 98%
Sigma-Aldrich
Trichlorofluoromethane, ≥99.5%
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Ethylbenzene, anhydrous, 99.8%
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1,2-Dichloroethylene, mixture of cis and trans, 98%
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Dimethyl sulfide, ≥99%
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2-Methylpentane, ≥99%
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Cumene, 98%
Triphenylene, BCR®, certified reference material
Supelco
Hexane, analytical standard
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Ethylbenzene, analytical standard
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Cyclopentane, analytical standard
Sigma-Aldrich
Vitamin K1, BioXtra, ≥99.0% (sum of isomers, HPLC), mixture of isomers
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trans-1,2-Dichloroethylene, analytical standard
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2,2,4-Trimethylpentane, analytical standard
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Pentachlorobenzene, PESTANAL®, analytical standard
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Hexachlorobenzene, PESTANAL®, analytical standard
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Ergocalciferol, ≥98.0% (sum of enantiomers, HPLC)
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Chrysene, analytical standard
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2-Methylpentane, analytical standard
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Dimethyl sulfide, anhydrous, ≥99.0%
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1,2,4-Trimethylbenzene, 98%
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1,4-Dichlorobenzene, ≥99%
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1,2,3,4-Tetrachlorobenzene, 98%
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1-Pentene, ≥98.5% (GC)
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Dimethyl sulfide, ≥99%, FCC, FG
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Biphenyl, ReagentPlus®, 99.5%
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p-Xylene, anhydrous, ≥99%
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1-Chlorohexane, 99%
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9,10-Dimethylanthracene, 99%
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Acenaphthene, 99%